ProteoToul is part of several networks:

ProteoToul belongs to the regional network of technological facilities in life sciences and agronomy, Genotoul.

ProteoToul belongs to the national network of technological facilities in life sciences and agronomy, IBiSA.

ProteoToul is one of the three sites of the national Research Infrastructure in proteomics, ProFI (PIA, French Ministry of Research), which has been created in 2012.

PROTrEIN is a European innovative and interdisciplinary Research and Training network to train the next generation of researchers in computational proteomics.